Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015836705.1_cds_XP_016506411.1_19641
CDS Infomation

[gene=LOC107824181] [db_xref=GeneID:107824181] [protein=protein trichome birefringence-like 12] [protein_id=XP_016506411.1] [location=complement(join(8255..8584,8809..8894,8962..9048,9545..9675,9921..10198,10301..10352,10890..11027,11265..11785))] [gbkey=CDS]
Sequence

ATGGCGTCCAAGTTTACCCCAAAGCTTTTCTCATGGCTTATTCTACCAACATTGTTACTC
ATTTCTCTCTACTCTTTATCTCTTCCTCTTTACACTCCCACTCCAAAACCCAAAATTCCC
ATCTCATCCTCTTGTAATCTCTTCAAAGGCAAGTGGATCAACGACCCGAATCGCAAACCC
ATTTACGATGAGTCCTGCCCGTTTCACAGGAACGCCTGGAACTGCCTCAGAAACCAAAGG
GAAAACATGGGTCGGATCAATTCATGGAAATGGGTACCCGACAAGTGTGATTTGGCTCGG
ATCGATCCGGTTGAGTTCTTGGGTTTAATGAGGAACAAGAATATTGGGTTTGTAGGGGAT
TCGTTGAATGAGAATTTCTTGGTTTCGTTTTTGTGTATACTAAGAGTAGCTGATTCTGGT
GCAAAGAAATGGAAGAGAAAGGGGGCTTGGAGAGGAGCTTATTTTCCAAAGTTTAATGTT
ACTGTGGCTTATCATCGTGCTGTTTTGCTCGCGAAATATGAGTGGCAGCCAAAACAGCTT
GACGACTCCAACCAAGATGGATTAAAGGGAATATATCGAGTAGATGTTGATATTCCAGCA
GATGATTGGGCTCATATTGGTGCCTTTTATGATGTTCTAGTCTTCAACACTGGTCACTGC
AATTTTGCATTGTTAATTATTCCAGTTGTGTCTGTTCAAACTTCAAAGAAATTCCGGAAC
AATGNCAATTCATGGAAATGGGTACCCGACAAGTGTGATTTGGCTCGGATCGATCCGGTT
GAGTTCTTGAGTTTAATGAGGAACAAGAATATTGGGTTTGTTGGGGATTCGTTGAATGAG
AATTTCTTGGTTTCGTTTTTGTGTATACTAAGAGTAGCTGATTCTGGTGCAAAGAAATGG
AAGAGAAAGGGGGCTTGGAGAGGAGCTTATTTTCCGAAGTTTAATGTTACTGTGGCTTAT
CATCGTGCTGTTTTGCTCGCGAAATATGAGTGGCAGCCAAAACAACTTGATGACTCCAAC
CAAGATGGATTGAAGGGAAGATATCGAGTAGATGTCGATATTCCAGCAGATGATTGGGCT
CATATTGGTTCCTTTTATGATGTTTTAGTCTTCAACACTGTGGAAGGTGTTATCTTGCTT
CTTTTGGGTGTGAGTGTACCAGAGGAAATTGAAGTGCCGATGGAGGATGAGCTAGGTAGA
TCAGCTGCAAGTTCTATATTCACTGCGCGGGCTACTCTTGAGAATAAGCCGACTAAAAGA
CTTCAATATGAGTTTTTCTCTGTCTCTAGACACGTAATGACAAGTTTTCTGAAGAAAATC
TTACTGATACCTGAACAGCTTGACCTGTGGTTTGATCCCAGATATAATGGGGTTAACAAA
GAAGCAAGGCGACTAAATCATCTCATTGAAGAGGTTCTAAAAGGCTCAAATATCAGAATC
CTCGATCTGACTCACTTGAGCGAGTTCAGGGCAGATGCCCATCCTGCGATTTGGTTGGGG
AAAAAGGATGCAGTGGCTGTCTGGGGTCAGGACTGTATGCACTGGTGCCTTCCAGGTGTT
CCAGATACATGGGTTGATATTCTGGCCCAGCTTATGAATCATTATATTTTGGAGACAGGG
TAA

Peptide Sequence

PEP ID

XP_016506411.1
PEP Infomation

PREDICTED: protein trichome birefringence-like 12 [Nicotiana tabacum]
Sequence

MASKFTPKLFSWLILPTLLLISLYSLSLPLYTPTPKPKIPISSSCNLFKGKWINDPNRKP
IYDESCPFHRNAWNCLRNQRENMGRINSWKWVPDKCDLARIDPVEFLGLMRNKNIGFVGD
SLNENFLVSFLCILRVADSGAKKWKRKGAWRGAYFPKFNVTVAYHRAVLLAKYEWQPKQL
DDSNQDGLKGIYRVDVDIPADDWAHIGAFYDVLVFNTGHCNFALLIIPVVSVQTSKKFRN
NXNSWKWVPDKCDLARIDPVEFLSLMRNKNIGFVGDSLNENFLVSFLCILRVADSGAKKW
KRKGAWRGAYFPKFNVTVAYHRAVLLAKYEWQPKQLDDSNQDGLKGRYRVDVDIPADDWA
HIGSFYDVLVFNTVEGVILLLLGVSVPEEIEVPMEDELGRSAASSIFTARATLENKPTKR
LQYEFFSVSRHVMTSFLKKILLIPEQLDLWFDPRYNGVNKEARRLNHLIEEVLKGSNIRI
LDLTHLSEFRADAHPAIWLGKKDAVAVWGQDCMHWCLPGVPDTWVDILAQLMNHYILETG

Transcript Sequence

Gene sequence data has not been registered.